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MCP server · Science

Emdb

· github.com/pipeworx-io/mcp-emdb

EMDB (EBI Electron Microscopy Data Bank) MCP — keyless.

Unclaimed science
InstallView source
34Low

Scored 4 months ago · breakdown

About Emdb

Emdb is an MCP server in the Science category: eMDB (EBI Electron Microscopy Data Bank) MCP — keyless.

Install

From source
git clone https://github.com/pipeworx-io/mcp-emdb

This server has no ConduID identity, so agent calls to it are not receipted. Pin the version you install and review the source before granting it credentials.

Tools (2)

get_mapGet a single EMDB entry by its EMDB id (e.g. "EMD-1080"). Returns a trimmed record: title, sample, structure-determination method, resolution (Angstrom), and release date. EMDB holds 3D electron-microscopy density maps of proteins, complexes, and viruses. Keyless.

Parameters not published.

search_mapsSearch the EBI Electron Microscopy Data Bank (EMDB) for 3D cryo-EM / electron-tomography density maps by free-text keyword (e.g. "ribosome", "spike protein", "apoptosis"). Returns matching maps with EMDB id, title, resolution (Angstrom), and structure-determination method. Keyless. Complements PDB/AlphaFold (which hold atomic/experimental structures).

Parameters not published.

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Questions

About Emdb

How do I install Emdb?

No package has been published for this server, so install it from source: clone the repository and follow its README.

Is Emdb safe to use with an AI agent?

Its trust score is 34 out of 100 (low). Conduid hasn't run static security checks on this repository yet, so review the source yourself before granting it credentials. It has no ConduID identity yet, so agent calls to it are not receipted.

Is Emdb still maintained?

Conduid hasn't recorded a commit date for this repository yet. Check the repository directly for recent activity.