About Gwas Catalog
Gwas Catalog is an MCP server in the Healthcare category: gWAS Catalog (EBI/NHGRI) MCP — curated catalog of genome-wide association studies.
Install
git clone https://github.com/pipeworx-io/mcp-gwas-catalogThis server has no ConduID identity, so agent calls to it are not receipted. Pin the version you install and review the source before granting it credentials.
Tools (3)
get_snpGWAS Catalog: look up a single-nucleotide polymorphism (SNP) by rsID. Returns functional class, chromosome/region locations, and mapped genes (with up/downstream + distance). Keyless, from EBI/NHGRI.
Parameters not published.
snp_associationsGWAS Catalog: get trait/disease associations for a SNP (rsID) — risk allele, p-value, odds ratio per copy, beta/effect size, and risk allele frequency. Keyless, from EBI/NHGRI.
Parameters not published.
studies_by_traitGWAS Catalog: find genome-wide association studies for a disease/trait (EFO trait, e.g. "asthma" or "type 2 diabetes"). Returns accession, PubMed ID, title, journal, date, sample size. Keyless, from EBI/NHGRI.
Parameters not published.
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