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MCP server · Healthcare

io.github.cyanheads/chembl-mcp-server

· github.com/cyanheads/chembl-mcp-server

Link compounds to protein targets, rank bioactivity, and look up drug mechanisms and indications.

Unclaimed healthcare
InstallView source
37Low

Scored 3 months ago · breakdown

About io.github.cyanheads/chembl-mcp-server

io.github.cyanheads/chembl-mcp-server is an MCP server in the Healthcare category: link compounds to protein targets, rank bioactivity, and look up drug mechanisms and indications.

Install

Claude Code
claude mcp add io-github-cyanheads-chembl-mcp-server -- npx -y @cyanheads/chembl-mcp-server
npx
npx -y @cyanheads/chembl-mcp-server

This server has no ConduID identity, so agent calls to it are not receipted. Pin the version you install and review the source before granting it credentials.

Tools (8)

chembl_dataframe_describeList the tables and columns staged on a canvas, so you can write correct SQL before querying.

Parameters not published.

chembl_dataframe_dropDrop a named staged table from a canvas. Opt-in via `CHEMBL_DATAFRAME_DROP_ENABLED=true` — absent from `tools/list` when off, since TTL already reclaims staged tables.

Parameters not published.

chembl_dataframe_queryRun a read-only SQL `SELECT` over the bioactivity rows spilled to a canvas — rank, group, dedupe, aggregate across the full set.

Parameters not published.

chembl_get_assayAssay provenance behind a bioactivity row — type, target, organism, and ChEMBL's 1–9 confidence score.

Parameters not published.

chembl_get_bioactivitiesThe flagship compound↔target bridge: bioactivity measurements for a molecule, a target, or **both** (the compound×target pair), ranked on `pchembl_value`, or the measurements without one via `potency_view`. Large sets spill to a canvas.

Parameters not published.

chembl_get_drug_infoDrug pharmacology — mechanism(s) of action, molecular target(s), action type, first-approval year, and clinical indications.

Parameters not published.

chembl_search_moleculesFind compounds by name / ChEMBL ID / InChIKey, or run a structure search (exact \

Parameters not published.

chembl_search_targetsResolve a protein / gene symbol / UniProt accession to the ChEMBL target ID `chembl_get_bioactivities` needs.

Parameters not published.

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Questions

About io.github.cyanheads/chembl-mcp-server

How do I install io.github.cyanheads/chembl-mcp-server?

Run claude mcp add io-github-cyanheads-chembl-mcp-server -- npx -y @cyanheads/chembl-mcp-server, then add the server to your MCP client's configuration.

Is io.github.cyanheads/chembl-mcp-server safe to use with an AI agent?

Its trust score is 37 out of 100 (low). Conduid hasn't run static security checks on this repository yet, so review the source yourself before granting it credentials. It has no ConduID identity yet, so agent calls to it are not receipted.

Is io.github.cyanheads/chembl-mcp-server still maintained?

Conduid hasn't recorded a commit date for this repository yet. Check the repository directly for recent activity.