About mcp-mydisease
mcp-mydisease is an MCP server in the Science category: provides dataset statistics and release metadata for MyDisease.info, enabling users to query disease-related data through natural language via the Pipeworx gateway.
Install
git clone https://github.com/pipeworx-io/mcp-mydiseaseThis server has no ConduID identity, so agent calls to it are not receipted. Pin the version you install and review the source before granting it credentials.
Tools (3)
diseaseFetch the full aggregated annotation object for a single disease id. Accepts MONDO ("MONDO:0015967"), DOID ("DOID:9351"), OMIM ("OMIM:125853") and other supported ontology ids. Returns cross-referenced data including MONDO ontology (labels, synonyms, xrefs, parents/children), gene-disease associations from DisGeNET, phenotypes from HPO, and chemical-disease relationships from CTD. Resolve a name to an id first via the "query" tool.
Parameters not published.
metadataReturns MyDisease.info build metadata: total disease document count, available annotation sources (MONDO, DOID, OMIM, DisGeNET, HPO, CTD), and their current release versions.
Parameters not published.
querySearch MyDisease.info for diseases by free-text name or fielded query. Returns matching hits, each keyed by a MONDO disease id (e.g. "MONDO:0015967") with the best-matching ontology and annotation keys. Use this to resolve a disease name to canonical ontology ids before calling the "disease" tool. Free text like "diabetes" or "asthma" works; fielded queries like "mondo.label:asthma" or "disgenet.xrefs.disease_name:..." narrow the search.
Parameters not published.
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