About plantcv-mcp
plantcv-mcp is an MCP server in the Analytics category: plant phenotyping via PlantCV — returns traits plus the segmentation overlay they came from.
Install
uvx
uvx plantcv-mcppip
pip install plantcv-mcpThis server has no ConduID identity, so agent calls to it are not receipted. Pin the version you install and review the source before granting it credentials.
Tools (14)
calibrate_scale_from_marker(image_path, x, y, w, h, marker_length_mm)`px_per_mm` from a marker of known real size
Parameters not published.
correct_lens_distortion(image_path, checkerboard_dir, ...)a fisheye/wide-angle image undistorted via checkerboard calibration, written next to the input or to `output_path`
Parameters not published.
list_methods()channels, methods, object types, pinned PlantCV version
Parameters not published.
measure(session_id, analyses, px_per_mm, ...)traits, or a raised error on a degenerate mask
Parameters not published.
measure_images(image_paths, channel, method, ...)one recipe across many images (per plant with a grid); traits only where valid; time-budgeted
Parameters not published.
measure_morphology(session_id, prune_size, tangent_size, ...)leaf/stem skeleton traits + the numbered-segment overlay
Parameters not published.
measure_regions(session_id, nrows, ncols, ...)one row per plant in a tray (RGB traits, thermal temperatures or HSI index stats), plus the numbered overlay
Parameters not published.
measure_spectral(session_id, indices, ...)index statistics (and, opt-in, per-band reflectance)
Parameters not published.
measure_thermal(session_id, ...)max/min/mean/median °C under the mask
Parameters not published.
refine(session_id, ops)a NEW session with a cleaned-up mask, plus its overlay
Parameters not published.
Show all 14 tools
segment(image_path, channel, method, ...)overlay + diagnostics + warnings — **no traits**
Parameters not published.
segment_hyperspectral(envi_path, index, threshold, ...)an HSI session from a spectral-index threshold + pseudo-RGB overlay
Parameters not published.
segment_thermal(path, min_c, max_c, ...)a thermal session from a °C band + grey-frame overlay
Parameters not published.
suggest_segmentation(image_path, channel, method)contact sheets, and what each `object_type` would yield
Parameters not published.
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