BearWisdom

Structural code intelligence that's un-bear-ably fast.
31 languages. Cross-framework graph. Hybrid search. One index.

Features · Quick Start · Web Explorer · CLI Reference · Architecture · MCP Server · Benchmarks

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What Is This?

BearWisdom is a code intelligence engine that builds a structural understanding of your entire codebase — symbols, edges, call hierarchies, concepts, and cross-language flows — and makes it searchable in milliseconds.

It parses your code with tree-sitter, stores everything in a local SQLite graph database, and exposes the results through a CLI, MCP server, web UI, and Claude Code agent. Think of it as a bear that hibernated with your codebase and woke up knowing where everything is.

Why "BearWisdom"? Because understanding code shouldn't require grizzly effort. Let the bear do the heavy lifting.

Features

The Bear Necessities

• 31 languages — C#, TypeScript, JavaScript, Python, Rust, Go, Java, C/C++, Ruby, PHP, Kotlin, Swift, Scala, Haskell, Elixir, Dart, Lua, R, HTML, CSS, JSON, YAML, Bash, SQL, Markdown, XML, Dockerfile, and more
• Structural graph — symbols, edges (calls, inherits, implements, type_ref, instantiates), concepts, and annotations stored in SQLite
• 5-priority resolver — namespace imports, scope analysis, qualified name matching, file-path correlation, and kind-based inference
• Cross-framework connectors — Spring Boot, Django, .NET DI, EF Core, gRPC, GraphQL, Electron IPC, Tauri IPC, React/Zustand, and HTTP API routes
• Smart context — describe a task in natural language and get the ranked symbols and files most relevant to it, ready for LLM context windows
• Full trace — end-to-end execution flow tracing that walks both the call graph and cross-framework flow edges (DI, HTTP, events) from any symbol or auto-detected entry points
• Flow visualization — Sankey diagram in the web explorer showing architecture flows with click-to-pin highlighting, depth control, and symbol-specific tracing

Search That's Barely Believable

• FTS5 symbol search — BM25-ranked full-text search across all symbol names and qualified names
• Fuzzy finder — nucleo-powered fuzzy matching for files (Ctrl+P) and symbols (Ctrl+T)
• Content search — FTS5 trigram index for substring search across file content
• Grep — gitignore-aware regex/literal search with scope filtering
• Hybrid search — FTS5 + ONNX vector embeddings fused via Reciprocal Rank Fusion
• Semantic search — natural language queries via CodeRankEmbed embeddings

Analysis That's Polar-izing

• Architecture overview — language breakdown, hotspot detection, entry point discovery
• Blast radius — "if I change X, what breaks?" via recursive CTE graph traversal
• Call hierarchy — incoming and outgoing call chains with edge provenance
• Full trace — end-to-end execution tracing from entry points through call chains and cross-framework flow edges (DI, HTTP, events, IPC)
• Smart context — natural language task description to ranked symbols for LLM context windows (multi-strategy seeding: FTS5 raw, per-keyword, LIKE fallback)
• Concept discovery — automatic namespace grouping with member assignment
• Subgraph export — filtered graph export for D3/Cytoscape visualization

Ways to Interact

Interface	Description
bw CLI	30+ JSON-output commands for scripts and agents
Web Explorer	React + D3 force-directed knowledge graph with Sankey flow diagrams
MCP Server	Model Context Protocol server for Claude and other LLMs
Claude Code Agent	Conversational subagent that wraps the CLI

Quick Start

Prerequisites

• Rust 1.75+ (edition 2021)
• Node.js 18+ (for the web explorer, optional)
• ONNX Runtime (required for AI search / semantic embeddings)
  • Install via Python: pip install onnxruntime and set ORT_DYLIB_PATH to the onnxruntime shared library inside that package, or download a standalone release from github.com/microsoft/onnxruntime/releases and point ORT_DYLIB_PATH at onnxruntime.dll / libonnxruntime.so / libonnxruntime.dylib
  • Without ORT_DYLIB_PATH the engine starts normally but bw hybrid, bw embed, and AI Search in the web UI will return an error

Build

# Clone the repo
git clone https://github.com/MariusAlbu/BearWisdom.git
cd BearWisdom

# Build all crates
cargo build --release

# The CLI binary is at:
./target/release/bw --help

Index a Project

# Full index with concept discovery + automatic embedding (if ORT_DYLIB_PATH is set)
bw open /path/to/your/project

# Check index stats
bw status /path/to/your/project

The index is stored at <project>/.bearwisdom/index.db — a single SQLite file. Add .bearwisdom/ to your project's .gitignore.

For AI search, bw open automatically computes CodeRankEmbed embeddings after indexing when ORT_DYLIB_PATH is set. You can also run embedding standalone:

# Download the CodeRankEmbed model first (one time)
# Place it at <project>/models/CodeRankEmbed  OR  ~/.bearwisdom/models/CodeRankEmbed

# Compute embeddings independently
bw embed /path/to/your/project

Search

# Find symbols by name
bw search-symbols /path/to/project "ProductService"

# Fuzzy find files (like Ctrl+P)
bw fuzzy-files /path/to/project "ProdServ"

# Fuzzy find symbols (like Ctrl+T) — yes, it's *fuzzy*, like a bear
bw fuzzy-symbols /path/to/project "GetById"

# Grep across files
bw grep /path/to/project "TODO" --case-insensitive

# Content search (trigram, min 3 chars)
bw search-content /path/to/project "repository"

# Hybrid search (FTS + embeddings when model is available)
bw hybrid /path/to/project "authentication middleware"

Navigate

# Go to definition
bw definition /path/to/project "ProductService"

# Find all references
bw references /path/to/project "IProductRepository"

# List symbols in a file
bw file-symbols /path/to/project "Services/ProductService.cs"

# Full symbol detail
bw symbol-info /path/to/project "ProductService"

Analyze

# Architecture overview
bw architecture /path/to/project

# Blast radius — what breaks if I change this?
bw blast-radius /path/to/project "Product" --depth 3

# Who calls this?
bw calls-in /path/to/project "GetById"

# What does this call?
bw calls-out /path/to/project "PlaceOrder"

# Cross-language flow trace
bw trace-flow /path/to/project "Controllers/OrderController.cs" 45

Concepts

# Discover namespace concepts automatically
bw discover-concepts /path/to/project

# List concepts
bw concepts /path/to/project

# Show concept members
bw concept-members /path/to/project "MyApp.Services"

# Export graph filtered by concept
bw export-graph /path/to/project --filter "@MyApp.Services"

Web Explorer

BearWisdom includes a web-based knowledge graph explorer. It's a React + D3 application that lets you visually explore the structural graph.

Run

# Build the frontend (one time)
cd web && npm install && npm run build && cd ..

# Start the server
cargo run -p bearwisdom-web --release -- --static-dir web/dist

# Open http://localhost:3030

What You Can Do

• Browse your filesystem and select a project to index
• Explore the force-directed knowledge graph — drag, zoom, pan, hover to highlight connections
• Filter by concept — click a concept in the sidebar to isolate that subgraph
• Search 6 ways — Symbols, Fuzzy, Files, Content, Grep, and AI Search tabs
• Enable AI Search — the web UI has an "Enable AI Search" button that triggers embedding computation on demand (requires ORT_DYLIB_PATH set in the server environment)
• Inspect symbols — click a node to see its signature, documentation, incoming/outgoing calls
• View source — file/content/grep results open a full code viewer with line highlighting
• Resize the detail panel — drag the left edge to make room for code review
• Flow tab — Sankey diagram showing end-to-end execution flows across the codebase. Trace from specific symbols or auto-detected entry points. Click nodes to pin paths, hover to explore connections. Depth slider controls trace depth. Node colors indicate symbol kind (class, method, interface)

Development

# Backend (auto-rebuilds on change)
cargo run -p bearwisdom-web -- --port 3030

# Frontend dev server (hot reload, proxies /api to :3030)
cd web && npm run dev
# Open http://localhost:5173

CLI Reference

All commands output JSON to stdout. Envelope: {"ok": true, "data": {...}} or {"ok": false, "error": "..."}.

Global flag: --full restores verbose output (signatures, doc comments, children).

Command	Description
bw open <path>	Full index + concept discovery + post-index embedding
bw status <path>	Index stats (read-only)
bw embed <path>	Compute CodeRankEmbed embeddings standalone
bw architecture <path>	Language stats, hotspots, entry points
bw search-symbols <path> <query>	FTS5 symbol search
bw fuzzy-files <path> <pattern>	Fuzzy file finder
bw fuzzy-symbols <path> <pattern>	Fuzzy symbol finder
bw search-content <path> <query>	FTS5 trigram content search
bw grep <path> <pattern>	Regex/literal grep
bw hybrid <path> <query>	Hybrid FTS + vector search
bw definition <path> <symbol>	Go to definition
bw references <path> <symbol>	Find all references
bw file-symbols <path> <file>	Symbols in a file
bw symbol-info <path> <symbol>	Full symbol detail
bw blast-radius <path> <symbol>	Impact analysis
bw calls-in <path> <symbol>	Incoming call hierarchy
bw calls-out <path> <symbol>	Outgoing call hierarchy
bw trace-flow <path> <file> <line>	Cross-language flow
bw full-trace <path> [symbol]	End-to-end execution trace (call graph + flow edges)
bw smart-context <path> <task>	Smart context selection for LLM prompts
bw investigate <path> <symbol>	Combined deep-dive (symbol info + callers + callees + blast radius)
bw complete-at <path> <file> <line>	Scope-aware symbol completion
bw diagnostics <path> <file>	File diagnostics (unresolved refs, low confidence edges)
bw quality-check --baseline <file>	Regression testing against quality baseline
bw import-scip <path> --scip <file>	Import SCIP index for high-confidence edges
bw concepts <path>	List concepts
bw discover-concepts <path>	Auto-discover concepts
bw concept-members <path> <concept>	Concept members
bw export-graph <path>	Graph export (JSON)

Architecture

See the Architecture Diagram for a visual overview.

bearwisdom/                    Core library — parser, indexer, query, search, bridge
  src/
    parser/                    Tree-sitter extractors (31 languages)
    indexer/                   Full + incremental indexing
    query/                     Architecture, blast radius, call hierarchy, full trace,
                               smart context, investigate, diagnostics, completion,
                               concepts, search, subgraph, definitions
    search/                    Grep, FTS5, fuzzy, hybrid, embeddings, vector store
    bridge/                    SCIP import, background enrichment
    connectors/                Cross-framework edge detection (Spring, Django, EF Core, etc.)
    db/                        SQLite schema, database management

bearwisdom-cli/                CLI binary (bw) — 30+ JSON commands
bearwisdom-mcp/                MCP server (bw-mcp) — tool registration
bearwisdom-web/                Web server (bw-web) — Axum HTTP + static files + Sankey flows
bearwisdom-profile/            Language detection, project scanning
bearwisdom-bench/              Benchmark harness

benchmarks/                    LLM benchmark runner (bw-bench) — API-based task evaluation
web/                           React + D3 frontend (Vite + TypeScript)
tests/                         Integration test suite
agents/                        Claude Code agent definitions

Bundled Dependencies

sqlite-vec is statically linked into the BearWisdom binary. No SQLITE_VEC_PATH environment variable or external .dll/.so is needed — vector search works out of the box.

ONNX Runtime is loaded dynamically at runtime via the load-dynamic feature. Set ORT_DYLIB_PATH to the path of the shared library before running any embedding command. sqlite-vec handles storage; ONNX Runtime handles inference.

Database Schema

The SQLite database stores:

Table	Purpose
files	Indexed files with path, language, content hash, and timestamp
symbols	Extracted symbols (name, qualified_name, kind, line, signature, doc_comment)
edges	Directed relationships (calls, inherits, implements, type_ref, instantiates) with confidence
unresolved_refs	References pending LSP/SCIP resolution
imports	Import/using directives per file, used by the 5-priority resolver
routes	HTTP route endpoints extracted by framework connectors
db_mappings	EF Core entity-to-table mappings
symbols_fts	FTS5 virtual table for BM25-ranked symbol search
annotations	Free-form markdown notes attached to symbols
concepts	Namespace groupings with auto_pattern for membership matching
concept_members	Symbol-to-concept assignments (manual and auto)
lsp_edge_meta	LSP-resolved edge provenance
fts_content	FTS5 trigram virtual table for file content search
code_chunks	AST-aware chunks aligned to symbol boundaries, used for embeddings
flow_edges	Cross-language flow edges (TS→C#, gRPC client→server, etc.)
search_history	Recent and saved searches with query type and scope

MCP Server

BearWisdom ships an MCP (Model Context Protocol) server that exposes all capabilities as tools for Claude Code and other LLM agents. The server indexes the project in the background on startup and makes all query tools available immediately.

Setup

# Build the MCP server (release recommended — it runs as a long-lived process)
cargo build --release -p bearwisdom-mcp

# Register it for a specific project
./target/release/bw-mcp register --project /path/to/your/project

This writes a bearwisdom entry into <project>/.mcp.json. Next time you open Claude Code in that project directory, the MCP server starts automatically.

Manual usage

# Run standalone (indexes current directory by default)
./target/release/bw-mcp

# Run for a specific project
./target/release/bw-mcp --project /path/to/your/project

# Unregister from a project
./target/release/bw-mcp unregister --project /path/to/your/project

The server communicates over stdio using JSON-RPC (MCP protocol). On startup it runs a full index in the background — tool calls during indexing will block briefly until the current batch finishes.

Claude Code Agent

The agents/bearwisdom.md agent lets you interrogate any codebase conversationally:

> /bearwisdom

You: What's the architecture of this project?
Bear: Running bw architecture... [shows language stats, hotspots, entry points]

You: Who calls ProductService?
Bear: Running bw calls-in ProductService... [shows call hierarchy]

You: What would break if I change the Order model?
Bear: Running bw blast-radius Order --depth 3... [shows impact analysis]

Project Structure

Crate	Type	Description
bearwisdom	lib	Core engine — 31-language parser, graph DB, hybrid search
bearwisdom-cli	bin (bw)	CLI with 30+ JSON commands
bearwisdom-mcp	bin (bw-mcp)	MCP server for LLM agents
bearwisdom-web	bin (bw-web)	Axum HTTP server + React UI
bearwisdom-profile	lib	Language detection, project scanning
bearwisdom-bench	bin	Index benchmarks
bw-bench	bin	LLM benchmark runner (in benchmarks/)

Benchmarks

BearWisdom includes a benchmark harness (bw-bench) that compares code intelligence quality across three conditions:

• MCP: BearWisdom tools via MCP protocol
• CLI: BearWisdom tools via bw CLI commands
• Native: Standard Read/Grep/Glob tools only

Tested across 4 projects (eShop, SimplCommerce, go-gitea, react-calcom) with 10 tasks each covering 6 categories: symbol lookup, cross-file references, call hierarchy, impact analysis, architecture overview, and code navigation.

# Generate tasks from a test project
bw-bench generate --project /path/to/project --output bench-results/tasks.json

# Run benchmarks (all conditions)
bw-bench run --tasks bench-results/tasks.json --model claude-sonnet-4-6 --output bench-results/

# Generate report
bw-bench report --results bench-results/

# Full pipeline (generate + run + report)
bw-bench full --project /path/to/project --model claude-sonnet-4-6 --output bench-results/

Metrics: precision, recall, F1, efficiency (penalizes tool call count), token usage. Requires ANTHROPIC_API_KEY.

License

MIT License. See LICENSE-MIT for details.

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Built with the patience of a bear and the precision of tree-sitter.
May your searches always be fuzzy in the right way. 🐻