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MCP server · Developer Tools

ChimeraX MCP

MCP server connecting AI assistants to UCSF ChimeraX for molecular visualization and structural biology

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Scored a month ago · breakdown

About ChimeraX MCP

ChimeraX MCP is an MCP server published by dovas-net in the Developer Tools category: mCP server connecting AI assistants to UCSF ChimeraX for molecular visualization and structural biology.

The repository has 22 stars and 1 forks, with the last commit 26 days ago. Recent commit activity is the strongest signal that reported issues will get attention.

Install

From source
git clone https://github.com/dovas-net/chimeraX-mcp

This server has no ConduID identity, so agent calls to it are not receipted. Pin the version you install and review the source before granting it credentials.

Tools (2)

get_atomspec_guideReference guide for atom specification syntax

Parameters not published.

run_commandExecute any ChimeraX command directly

Parameters not published.

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Questions

About ChimeraX MCP

How do I install ChimeraX MCP?

No package has been published for this server, so install it from source: clone the repository and follow its README.

Is ChimeraX MCP safe to use with an AI agent?

Its trust score is 39 out of 100 (low). Conduid hasn't run static security checks on this repository yet, so review the source yourself before granting it credentials. It has no ConduID identity yet, so agent calls to it are not receipted.

Is ChimeraX MCP still maintained?

Yes — the last commit was 26 days ago. The repository has 22 stars and 1 forks.