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PubChem

by · github.com/sssjiang/pubchem_mcp_server

PubChem MCP Server

Unclaimed last commit 6 months ago devtools
InstallView source
49Fair

Scored just now · breakdown

About PubChem

PubChem is an MCP server published by sssjiang in the Developer Tools category: pubChem MCP Server. It has been installed 0 times through Conduid.

The repository has 10 stars and 4 forks, with the last commit 6 months ago. Six months or more without a commit doesn't mean the server is broken, but check the open issues (0) before depending on it in production.

Install

Install
npx pubchem-mcp-server

This server has no ConduID identity, so agent calls to it are not receipted. Pin the version you install and review the source before granting it credentials.

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Security checks

  • ·README presentNot checked yet.
  • ·License declaredNot checked yet.
  • ·Tests presentNot checked yet.
  • ·Dependencies pinnedNot checked yet.
  • ·No dynamic code executionNot checked yet.
  • !Scoped permissionsDoesn't declare a permission scope. Assume it can do anything its process can.

README

pubchem mcp server

the mcp is used to extract the drug basic chemical infomation from pubchem API.

Requirements

  • Python 3.10
  • python-dotenv
  • requests
  • mcp
  • uvicorn

Installation

Install the dependencies(local):

  • Install directly from the project directory
git clone [project repository URL]
cd [project directory]
pip install .

Configure servers(pypi):

The servers_config.json follows the same structure as Claude Desktop, allowing for easy integration of multiple servers. Here's an example:

{
  "mcpServers": {
    "pubchem": {
      "command": "uvx",
      "args": ["pubchem_mcp_server"]
    }
  }
}

the result of this MCP

{
  "Drug Name": "Aspirin",
  "CAS Number": "50-78-2",
  "Molecular Weight": 180.16,
  "Molecular Formula": "C9H8O4",
  "SMILES": "CC(=O)OC1=CC=CC=C1C(=O)O",
  "Synonyms": [
    "2-(Acetyloxy)benzoic Acid",
    "Acetylsalicylic Acid",
    "Acetysal",
    "Acylpyrin",
    "Aloxiprimum",
    "Aspirin",
    "Colfarit",
    "Dispril",
    "Easprin"
  ],
  "InchI Key": "BSYNRYMUTXBXSQ-UHFFFAOYSA-N",
  "IUPAC Name": "2-acetyloxybenzoic acid",
  "ATC Code": "N02BA01",
  "Details Link": "https://pubchem.ncbi.nlm.nih.gov/compound/2244"
}

README mirrored from the source repository just now. The original is authoritative.

Questions

About PubChem

How do I install PubChem?

Run npx pubchem-mcp-server, then add the server to your MCP client's configuration. Conduid has recorded 0 installs, so the command is known to work with current clients.

Is PubChem safe to use with an AI agent?

Its trust score is 49 out of 100 (fair). It passes 0 of 1 static security checks; the failures are listed above. It has no ConduID identity yet, so agent calls to it are not receipted.

Is PubChem still maintained?

The last commit was 6 months ago, with 0 open issues. That's long enough that you should check whether the maintainer is responding to issues before depending on it.