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MCP server · Documentation

wjgoarxiv/pymol-mcp

by · github.com/wjgoarxiv/pymol-mcp

bond networks, F3/F4 order parameters, and TRACE cage perception + occupancy.

Unclaimed bioinformaticsclathrate-hydrategromacslammpsmcpmcp-servermodel-context-protocolmolecular-visualizationpymol
InstallView source
34Low

Scored a month ago · breakdown

About wjgoarxiv/pymol-mcp

wjgoarxiv/pymol-mcp is an MCP server published by wjgoarxiv in the Documentation category: bond networks, F3/F4 order parameters, and TRACE cage perception + occupancy.

Recent commit activity is the strongest signal that reported issues will get attention.

Install

From source
git clone https://github.com/wjgoarxiv/pymol-mcp

This server has no ConduID identity, so agent calls to it are not receipted. Pin the version you install and review the source before granting it credentials.

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Releases

v0.1.0pymol-mcp v0.1.0 · 2 Jul 2026Full Changelog: https://github.com/wjgoarxiv/pymol-mcp/commits/v0.1.0
Questions

About wjgoarxiv/pymol-mcp

How do I install wjgoarxiv/pymol-mcp?

No package has been published for this server, so install it from source: clone the repository and follow its README.

Is wjgoarxiv/pymol-mcp safe to use with an AI agent?

Its trust score is 34 out of 100 (low). Conduid hasn't run static security checks on this repository yet, so review the source yourself before granting it credentials. It has no ConduID identity yet, so agent calls to it are not receipted.

Is wjgoarxiv/pymol-mcp still maintained?

Yes — the latest release is v0.1.0 (2 Jul 2026), and the last commit was 3 months ago. The repository has 0 stars.