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  3. Gtex Link
MCP server · Healthcare

Gtex Link

· github.com/berntpopp/gtex-link

MCP server for the GTEx Portal: tissue-specific gene expression — median and per-sample TPM, top expressed genes per tissue, and gene/transcript annotation — as typed tools for LLM agents.

Unclaimed bioinformaticsclaudefastmcpgene-expressiongenefoundrygenomicsgtexllm-toolsmcpmcp-servermodel-context-protocoltranscriptomics
InstallView source
34Low

Scored a month ago · breakdown

About Gtex Link

Gtex Link is an MCP server in the Healthcare category: mCP server for the GTEx Portal: tissue-specific gene expression — median and per-sample TPM, top expressed genes per tissue, and gene/transcript annotation — as typed tools for LLM agents.

Install

From source
git clone https://github.com/berntpopp/gtex-link

This server has no ConduID identity, so agent calls to it are not receipted. Pin the version you install and review the source before granting it credentials.

Tools (9)

fetchFull gene detail for an `id` returned by `search`

Parameters not published.

get_gene_informationGene detail for a GENCODE ID or symbol

Parameters not published.

get_individual_expression_dataIndividual-sample expression (TPM)

Parameters not published.

get_median_expression_levelsMedian expression (TPM) per tissue

Parameters not published.

get_server_capabilitiesDiscover tools, datasets, tissues, limits, and workflows

Parameters not published.

get_top_expressed_genes_by_tissueTop expressed genes for a tissue

Parameters not published.

get_transcript_informationTranscript annotations for a GENCODE ID

Parameters not published.

searchNatural-language gene search; returns result documents (`id`/`title`/`url`)

Parameters not published.

search_genesSearch the GTEx Portal gene catalog by symbol or partial match

Parameters not published.

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Questions

About Gtex Link

How do I install Gtex Link?

No package has been published for this server, so install it from source: clone the repository and follow its README.

Is Gtex Link safe to use with an AI agent?

Its trust score is 34 out of 100 (low). Conduid hasn't run static security checks on this repository yet, so review the source yourself before granting it credentials. It has no ConduID identity yet, so agent calls to it are not receipted.

Is Gtex Link still maintained?

Conduid hasn't recorded a commit date for this repository yet. Check the repository directly for recent activity.