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MCP servers tagged drug-discovery

36 live MCP servers tagged "drug-discovery", ranked by trust score. Tags come from package metadata and repository topics, so this list covers servers across every category that work with drug-discovery.

36
live servers
43
avg trust
671
most stars
1

Opentargets MCP

nickzren

MCP server for Open Targets data

★ 19updated 8 days agoMIT
72
2

Rdkit MCP Server

tandemai-inc

MCP server that enables language models to interact with RDKit through natural language

★ 42updated 5 months agoMIT
69
3

Alphafold MCP Server

Augmented-Nature

A comprehensive Model Context Protocol (MCP) server that provides access to the AlphaFold Protein Structure Database through a rich set of tools and resources for protein structur…

★ 35updated 10 months agoNOASSERTION
66
4

Pdb MCP Server

Augmented-Nature

A Model Context Protocol (MCP) server that provides access to the Protein Data Bank (PDB) - the worldwide repository of information about the 3D structures of proteins, nucleic ac…

★ 27updated 10 months agoNOASSERTION
66
5

Augmented Nature Uniprot MCP Server

Augmented-Nature

A comprehensive Model Context Protocol (MCP) server providing advanced access to the UniProt protein database.

★ 20updated 10 months agoNOASSERTION
66
6

Biomed Agent

nickzren

Connecting AI to biomedical data

★ 15updated 11 days agoApache-2.0
64
7

Refua MCP

agentcures

MCP server exposing strict typed Refua tools for Boltz2 folding, affinity prediction, and BoltzGen design workflows.

updated 7 months agoMIT
62
8

ScienceClaw

ScienceClaw is a personal research assistant built with LangChain DeepAgents and AIO Sandbox infrastructure, adopting a completely new architecture beyond OpenClaw. It offers stro…

★ 671
59
9

K Dense Byok

An AI co-scientist powered by Scientific Agent Skills running on your desktop.

59
10

ChemMCP

Chemistry tools for AI agents via the Model Context Protocol — validate, describe, draw, and look up compounds from PubChem and ChEMBL.

44
11

Blatant Why

AI-powered biologics design campaign agent — multi-agent orchestration with BoltzGen, PXDesign, Protenix, and 200+ cloud tools. Antibodies, nanobodies, de novo binders, and beyond.

44
12

Awesome Bio Agent Skills

A curated collection of AI agent skills for biomedical research, covering genomics, proteomics, single-cell analysis, clinical AI, and protein design.

44
13

Augmented Nature Uniprot Server

A comprehensive Model Context Protocol server for accessing UniProt protein database with 26 bioinformatics tools for protein research, comparative genomics, and systems biology

42
14

Chematic

A pure-Rust cheminformatics library targeting RDKit feature parity — zero C/C++ by default.

39
15

MedClaw

elenalulu

Open-source biomedical research agent with 60+ offline tools: variant interpretation. Use via web chat UI or MCP (DeepSeek-harness compatible).

★ 2
34
16

Openclaw Medical Harness

MoKangMedical

🏥 Medical AI Agent Orchestration Framework. 5-step harness pipeline + MCP tools + multi-agent coordination.

★ 2updated 6 months ago
34
17

Awesome Scientific AI Tools

Discover AI tools, MCP servers, and agent skills for scientific research across literature, data, writing, and lab work

★ 1
34
18

Bioresearcher Skills

yeyuan98

Agent Skills/Plugins/Connectors for biomedical research with the biomcp-ts MCP server.

★ 1updated a month ago
34
19

Heuris BioMCP

SachinGawande2003

BioMCP - Comprehensive MCP server for bioinformatics and life sciences

★ 1
34
20

Lifesciences Research

AI Agent wrappers for Life Sciences APIs (Open Targets, ChEMBL, UniProt). Accelerating drug discovery with Model Context Protocol (MCP) and FastMCP.

34
21

Oncotarget Luad

Scientific MVP for LUAD target prioritization using knowledge graphs, GraphSAGE, and GraphRAG.

34
22

Novomcp

The open computational chemistry engine for drug discovery and materials science; MCP + REST + Workbench + Next.js dashboard, wrapping RDKit, GROMACS, AutoDock, OpenFold, Chai, Bo…

34
23

Oncora

Oncora — A Reproducible, Uncertainty-Aware Agentic Reasoning Platform for Oncology Drug Discovery (Rust-native, on-prem, MCP)

34
24

Chilecule

Agentic drug discovery workflows on fully open-source tooling: RDKit, AutoDock Vina/smina, fpocket, ChEMBL. MCP tool servers + Claude agents, with a retrospective validation harne…

34
25

Litmuz Agent

Claim-level verification for life-sciences research agents: honest, auditable, per-claim traffic-light verdicts against the primary literature and genomic reference data. MCP-nati…

34
26

Mychem MCP

MCP server for MyChem.info API

34
27

OpentargetMCP

Powerful Model Context Protocol (MCP) server for therapeutic discovery and drug repurposing using the Open Targets Platform GraphQL API.

34
28

Scikit

achillesrasquinha

A unified life science data layer for your AI agents - genomics, proteomics, drug discovery, clinical trials across 300+ databases.

34
29

Cyclicchamp MCP

MacromNex

CyclicCHAMP MCP server for cyclic peptide modeling

34
30

Sandboxaq

api-evangelist

SandboxAQ — independent third-party profile of a public API surface, by API Evangelist. SandboxAQ (SB Technology, Inc.) builds Large Quantitative Models (LQMs) — AI systems that f…

34
31

Afcycdesign MCP

MacromNex

AF-CycDesign MCP server for cyclic peptide design with AlphaFold

34
32

Pharmpapp MCP

MacromNex

PharmPApp MCP server for pharmaceutical peptide property prediction

34
33

DX LAB

ahmed200346

AI-powered drug discovery platform integrating intelligent knowledge search, molecule design, 3D visualization, patient-specific safety evaluation, hypothesis generation, and auto…

34
34

Cpmp MCP

MacromNex

CPMP MCP server for cyclic peptide membrane permeability prediction

34
35

Cyclicpeptide MCP

MacromNex

Cyclic peptide MCP server for cyclic peptide design and analysis

34
36

Sample Agentcore Scverse

aws-samples

No description published.

★ 2
30
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