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MCP servers tagged pubmed
38 live MCP servers tagged "pubmed", ranked by trust score. Tags come from package metadata and repository topics, so this list covers servers across every category that work with pubmed.
JamesANZ/medical-mcp
An MCP server that provides comprehensive medical information by querying multiple authoritative medical APIs including FDA, WHO, PubMed, Google Scholar, and RxNorm
Pubmed MCP Server
Search PubMed/Europe PMC, fetch articles and full text (PMC/EPMC/Unpaywall), citations, MeSH terms via MCP. STDIO or Streamable HTTP.
Paper Search MCP Nodejs
A Node.js implementation of the Model Context Protocol (MCP) server for searching and downloading academic papers from multiple sources, including **Web of Science**, arXiv, and m…
Pubcrawl
A peer-reviewed pub crawl through the literature — MCP server for PubMed & biomedical literature search
Local Deep Research
Local Deep Research achieves ~95% on SimpleQA benchmark (tested with GPT-4.1-mini). Supports local and cloud LLMs (Ollama, Google, Anthropic, ...). Searches 10+ sources - arXiv, P…
ScienceClaw
ScienceClaw is a personal research assistant built with LangChain DeepAgents and AIO Sandbox infrastructure, adopting a completely new architecture beyond OpenClaw. It offers stro…
Nature Academic Search
Academic Paper Search：面向中文科研用户的 Codex / Claude Code 文献检索 Skill + MCP；跨 CrossRef、PubMed、arXiv、OpenAlex、Europe PMC 检索去重，支持 Semantic Scholar 富化、ClinicalTrials.gov 试验与引用导出。
Scholarly Research
Consolidated MCP server for scholarly research across PubMed, ArXiv, Google Scholar, and JSTOR (5 powerful tools instead of 24)
Research Workflow Assistant
Open-source AI research assistant for VS Code + GitHub Copilot. Connects to PubMed, OpenAlex, Semantic Scholar, Europe PMC, CrossRef, and Zotero via MCP servers. Custom agents gui…
GenomeMCP
An AI-driven genomic intelligence system delivering structured ClinVar interpretation and high-precision exon, intron, and gene queries using the Model Context Protocol (MCP).
Scholar Megasearch
Massive multi-source academic literature search for Claude Code — one skill fans out subagents across 20+ scholarly databases (arXiv, Semantic Scholar, Crossref, OpenAlex, PubMed,…
Med Paper Assistant
Auditable MCP + cross-agent harness for autonomous and human-guided academic writing—from verified evidence to reviewed DOCX/PDF.
Biolink Agent
Multi-agent AI platform for biomedical & genomic research — query PubMed, ClinVar, Ensembl, UniProt and 10+ scientific databases with natural language.
Grados
The enrichment-grade MCP server for academic paper search and full-text extraction. For science.
Pubmed Search Agent
Search PubMed in plain English: NL query translation, MeSH resolution, semantic relevance filtering, related-article/citation search, and an MCP server tool — built with Claude Co…
Papers Skill
Literature search and paper analysis for an agent: the papers skill and a packaged paper-search-mcp
Athenaeum MCP
A unified, 100% free Model Context Protocol (MCP) server for academic research: meta-search, metadata, citation graphs, source/rigor validation, open-access PDF full-text reading,…
Litrag
Grounded RAG over PubMed abstracts with a built-in citation-faithfulness eval that flags hallucinated or unsupported claims. Live corpus ingestion via the PubCrawl MCP server. Lan…
Heat Protein Lab
An Antigravity 2.0 IDE experiment: visualizing heat effects on human proteins. Educational, not clinical.
Bioresearcher Skills
Agent Skills/Plugins/Connectors for biomedical research with the biomcp-ts MCP server.
Evidentia
Open-source medical citation verifier: catches fabricated DOI/PMID/NCT references with CLI, MCP, and Claude Code skill.
Heuris BioMCP
BioMCP - Comprehensive MCP server for bioinformatics and life sciences
pubspro/pubmed-search
Search PubMed and summarize biomedical literature, designed for AI health agents.
ThesisAgent
Keyword-driven academic paper search across 11 sources (arXiv, Semantic Scholar, OpenAlex, PubMed, IEEE, ACM, DBLP, Crossref, OpenAIRE, Springer, Scholar) → thesis-style PowerPoin…
Deepref MCP
DeepRef MCP — A Research Copilot MCP server that connects LLMs with scholarly APIs (arXiv, Semantic Scholar, PubMed) to retrieve and structure citations and abstracts for trustwor…
Pubmed Ml Platform
End-to-end ML platform for semantic search over PubMed biomedical abstracts
Litvar Link
MCP server for NCBI LitVar2: search the biomedical literature by genetic variant — the index linking variants to the publications that mention them, as typed tools for LLM agents.
Pubtator Link
MCP server for NCBI PubTator3: biomedical literature search with gene, variant, disease and chemical entity annotation — returns compact, citable passages instead of raw BioC.
ResearchAssistantMCP
MCP server for citation-finding research workflows: claim extraction, multi-source paper search (arXiv/Semantic Scholar/PubMed/OpenAlex), citation quality scoring, structured pape…
Pubmed Evidence
MCP server for reliable PubMed literature retrieval, BibTeX export, and evidence table generation for biomedical research agents.
Oncoteam
AI patient advocacy tool for cancer treatment. Understand labs, find clinical trials, track treatment — all from your phone. Open source, used in active treatment.
Evidence Gated Scientific Agent
Self-hosted evidence-gated scientific AI with isolated Python/R, independent review, deterministic validation, and complete provenance.
Pubmed MCP Advanced
A comprehensive Model Context Protocol (MCP) server that exposes PubMed and PubMed Central research literature APIs as intelligent tools for LLM applications.
Academica MCP
Hosted Model Context Protocol servers for biomedical literature, clinical trials, Open Payments, and healthcare-provider evidence
Scikit
A unified life science data layer for your AI agents - genomics, proteomics, drug discovery, clinical trials across 300+ databases.
Clinical Research MCP
MCP server for clinical research — PubMed papers, clinical trials, medical concepts. No API key needed.
Subsub
A Zotero librarian and research assistant in your browser or terminal, built on pi. Previews every library change, journals all edits, and writes literature notes in Markdown.
Biomed Evidence MCP
Six Model Context Protocol servers over curated biomedical data — ClinicalTrials.gov, openFDA (labels/events/recalls/approvals) and PubMed — pairing a pgvector hybrid-search docum…