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MCP servers tagged single-cell
10 live MCP servers tagged "single-cell", ranked by trust score. Tags come from package metadata and repository topics, so this list covers servers across every category that work with single-cell.
Omicverse
A python library for multi omics included bulk, single cell and spatial RNA-seq analysis.
Awesome Bio Agent Skills
A curated collection of AI agent skills for biomedical research, covering genomics, proteomics, single-cell analysis, clinical AI, and protein design.
Bio MCP
🧬 BioMCP — bioinformatics MCP server: 83 tools · 43 databases · PubMed/NCBI/BLAST/PDB/UniProt/enrichment · `pip install biomcp-server` · 生信 MCP 服务器
SpatialOmicsLab
SpatialOmicsLab: an integrated research environment for AI co-scientists in spatial transcriptomics
Genepattern MCP
MCP server that lets AI assistants (Claude, Cursor, Copilot) run GenePattern bioinformatics modules, manage cloud jobs, and access genomic data — all through natural language.
Bioinformatics MCP
🧬 A comprehensive MCP server for bioinformatics — 62 tools for genomics, transcriptomics, epigenetics & more. Connects AI agents to scanpy, biopython, squidpy, NCBI, UniProt, Ense…
CellTypePilot
Agent-native, local-first plugin for auditable single-cell annotation with governed evidence, contrastive review, conservative abstention, and human-reviewed draft outputs.
Codex Science
Codex-native life-sciences workflow pack with scientific skills, MCP connector catalog, and bilingual documentation.
Pd Target Identification
AI-powered multi-omics pipeline for Parkinson's Disease therapeutic target discovery and validation
Sample Agentcore Scverse
No description published.